Bioinformatics Centre and ARIS Cell

Madras Veterinary College, Chennai-600007

PUBLICATIONS

Biotechnology Information System Network - An Overview

  • Sujatha P.L, Kumarasamy P, Preetha S.P and Balachandran C.Vetinformatics: A New Paradigm for Quality Veterinary Services Research & Reviews:Journal of Veterinary Science and Technology ISSN: 2319–3441(online), ISSN: 2349-3690(print) Volume 5, Issue 2
  • Sujatha P.L, Ravi Reddy, Jaideep Mahendra, Kumanan K, Kumarasamy P, Preetha S.P and Pavithra S Identification of therapeutic inhibitors for the treatment of oral cancer using herbal bio-active principles by means of computational approach. IEEE conference publications.2016. 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB) Pages: 549 – 553
  • Felix Anto Ophelia E, Sujatha P.L and Kumarasamy.P Screening of bioactive compounds from natural remedies for photoaging to target Ap-1; An insilico approach. IEEE conference publications . 2016. 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB) Pages: 488 – 490
  • Pavithra S, Preetha S.P, Sujatha P.L, Srinivasan M.R, Karthikeyan A, Balachandran C, Venkateswaran K.V and Kumarasamy.P. A computational approach to use the active principles in custard apple (annona squamosa), as an ectoparasiticide by using potential target acetylcholinesterase of rhipicephalus sanguineus (brown dog tick) IEEE conference publications .2016. 2nd International Conference on Advances in Electrical, Electronics, Information, Communication and Bio-Informatics (AEEICB) Pages: 442 – 444
  • Sujatha P. L, Kumarasamy P, Preetha S. P, Balachandran C and KarthickJayaraman. Nanomedicine: Fate and Fortune in future to tailor a devide at Billonth of a meter. International Journal of General Medicine and Pharmacy Vol 5 (3) Pg. No. 19-24
  • Pavitha S, Preetha S.P, Sujatha P.L and Srinivasan S.R bršyÃuhâfëš V‰gL« czΣl e¢RfŸ Kalnadai Kathir
  • Preetha S.P, Punniamurthy N, Balachandran C, Cecilia J, MangalaGowri A, Sureshkannan S and Sujatha P.L Evaluation of antitumour potentials of Herbal based natural products in experimentally induced carcinogenesis in in-silico and in-vitro Bio mirror Sep 2015 Volume 7(1) 4-10
  • Sujatha P.L, Kumarasamy P and Preetha S.P Rapid vaccine identification in microbial genomes – an insilico approach with special reference to chicken gunya virus International journal of scientific research and engineering studies Vol.2 Iss.8 Aug 2015 35-46
  • Sakthivel M, Balasubramanyam D, Gopi H, Kumarasamy P, Raja A and Anilkumar R. Non-genetic influences on growth performance of a population of farm-bred New Zealand White rabbits. International Journal of Science, Engineering and Technology Research 4(3); 595-598.
  • Krishnan G, Thangvel A,Loganathasamy K, .Veerapandian C, Kumarasamy.P and Karunakaran M. Effect of fertility associated proteins on lipid peroxidation production in Holstein Friesian semen Indian Journal of Animal Sciences, 85 (11): 1176–1180.
  • Barani A,Rahumathulla P.S,Rajendran R,Kumarasamy P, Ganapathi P and Radha P Molecular characterization of Pulikulam cattle using microsatellite markers Journal of Animal Research 49(1): 36-39.
  • Pramod S and Kumarasamy P Amplification of Sheep Microsatellites using a Modified Touch Down PCR Programme The Indian Veterinary Journal 92(1): 18-21
  • Sujatha P.L, Kumarasamy P and Preetha S.P Rapid vaccine identification in microbial genomes – an insilico approach with special reference to chicken gunya virus International journal of scientific research and engineering studies Vol.2,Iss.8.Aug 201535-46
  • Sakthivel M, Balasubramanyam D, Gopi H, Kumarasamy P, Raja A and Anilkumar R Non-genetic influences on growth performance of a population of farm-bred New Zealand White rabbits. International Journal of Science, Engineering and Technology Research 4(3); 595-598.
  • Sasikalaveni A. Sujatha P.L, Parthiban M,Dhanapalan P and Wilson Aruni A Computational prediction and In-Silico analysis of Gyrase gene QRDR region coding resistance among Mycobacterium Tuberculosis isolates of India International Journal of Computational Bioinformatics and insilico modeling Vo.3, No.2, 2014.PP:362-368
  • Vijayalakshmi Ramshankar, Subha Yegnaswamy, Kumarasamy P and Krishnamurthy Arvind. Molecular docking studies shows tivozanib and lapatinib as potential inhibitors of EML4-ALK translocation mediated fusion protein in non small cell lung cancer. Bioinformation 10(10); 658-663
  • Aashmi Samantha E, Dhanapalan P, Kumarasamy P, Sujatha P.L, Devendran P and Sureshkannan S. Designing of Antiviral SiRNA for Targeting HIV-1 Subtype C in India.. Biomirror, October 2014 5(10): 78-88
  • Archana Hari, Kumarasamy P, Sujatha P.L, Sureshkannan S and Priya Sankar. A computational approach to use the Active Compounds in Rosemary (Rosmarinus officinalis), responsible for its anti-inflammatory properties, as potential ligands in Non-steroidal anti-inflammatory drugs (NSAIDs). Biomirror. June 2014. Vol.5(6).pp 52-58
  • Devendran P, Cauveri D, Murali N and Kumarasamy P. Growth Profile of Madras Red sheep in Farmer's Flock. The Indian Journal of Small Ruminants,2014 20(1): 20-23.
  • Akhilesh Upgade, Anusha Bhaskar and Kumarasamy P. Evaluation of Natural compound as a potential drug against DENV Non-structural proteins: In silico study. Asian Journal of Biochemistry, DOI: 10.3923/abj.2014 pp-01-11.
  • Karthick J, Praveen Kumar P.K and Sujatha Loganathan Insilico analysis of targeted drug delivery t hepatic cells using lipid nano-particles to treat liver diseases. Asian Journal of Pharm.Tech March 2014.161.3(4) 189-194 PP
  • Dash S.K. and Kumarasamy P Gender Detection in Emu Using DNA Marker of Related Ratite Species Indian Veterinary Journal, 91(1): 22-24.
  • Ganesan R, Dhanavanthan P, Kiruthika, Kumarasamy P, Murugan M and Jaishankar S. Factors influencing growth performance and estimation of genetic parameters in crossbred pig IOSR Journal of Agriculture and Veterinary Science. 2013.5(6): 63-71
  • Lakshmanan Jeyabal, Debdatta Ray,Sundaram Sureshkannan Kumaresan Nagarajan, Sivam Visnuvinayagam,Srikanth Ghosh, Partha Sarathi Banerjee, Shanmugam Chandra Sekar, Madiajagan Bagath, , Krishanan, Padmanath, Kuppusamy Rajarajan, Pentela Ravikumar First report of Moraxella Bovis Infection in Indian Cattle", Advances in Animal and Veterinary Sciences 1 (6): 202 – 204
  • Shobana Chandrasekar, Sumathi Thangarajan, Sujatha Loganathan, Sureshkannan Sundaram and Kumarasamy P. Molecular docking studies of Bacoside-A, an active component of Bacopa monniera with DJ1 for Anti-Parkinson's drug design Biomirror. 2013, 4(09): 1-4.
  • Dash S.K, Kumarasamy P, Malik H.N and Thiagarajan V. Phylogenetic analysis of ratite bird emu (Dromaius novaehollandiae) using sex specific sequence. Indian Journal of Animal Research. 2013. 47(3): 247-250
  • Ganesan R, Dhanavanthan P, Balasubramanyam D, Kumarasamy P and Kiruthika Estimates of genetic parameters of growth traits in Madras Red sheep. IOSR Journal of Agriculture and Veterinary Science. 2013, 3(5): 69-73
  • R.Deepalakshmi, Jothi Venkateswaran and Sureshkannan S Computational approach to structural change and dock score on VEGF molecule. International Journal of emerging trends in engineering and development. 2012.Vol.7.Issue 2 Page:339-349
  • Anil Kumar Mishra, Mayank Rawat, Abhishek, and S.Sureshkannan. Characterization and Lytic Activity of Endolysin Induced by bacteriophage SA4 against Mastitogenic Isolates of Staphylococcus of Bovine Origin Indian Veterinary Journal.2012.Vol.89 Page 24-25
  • Balasubramanyam.D, Raja.T.V, Jawahar.K.T.P., Jaishankar.S, Kumarasamy.P and Sivaselvam.S Characterization of Madras Red Sheep in their breeding tract FAO Animal Genetic Resources.An international Journal
  • Devendran P, Murali N, Panneerselvam S and Kandasamy N. Cytogenetic characterization of Coimbatore sheep Indian Journal of Small Ruminants. April 2009.Vol.15,55-61
  • Cauveri D, Sivaselvam S.N, Satyanarayana R, Thangaraju P and Devendran P Genetic diversity in three Indian goat populations using bovine microsatellites. Indian Journal of Small Ruminants. June 2009,Vol.15 190-193
  • Murali N, Devendran P and Panneerselvam S Cytogenetic studies on the chromosomes of Toda Buffaloes Buffalo Bulletin June 2009 Vol.28 No.2. 95-100.
Research Abstracts
  • Kumarasamy.P. Bioinformatics in sustainable management of AnGR of India. Paper presented at two days national symposium on "Policy planning for livelihood security through Domestic Animal Biodiversity" on 11.2.2016 at Faculty of Veterinary Science, SKUAST-J, R.S.Pura, Jammu
  • Kumarasamy.P. Job opportunities in Biotechnology. Paper presented at International conference on Advances in Electrical& Electronics, Information,Communication & Bio Informatics,AEEICB – 2016 held during 27-28 Feb 2016 at Prathyusha Engineering College, Chennai.
  • Pavithra S.Preetha S.P, Sujatha P.L, Srinivasan M.R, Karthikeyan A, Balachandran C,Venkateswaran K.V and Kumarasamy P. A computational approach to use the active principles in Custard apple(Annona squamosa), as an ectoparasiticide by using potential target Paper presented at 2nd International Conference on Advances in Electrical& Electronics, Information,Communication & Bio Informatics,AEEICB – 2016 held during 27-28 Feb 2016 at Prathyusha Engineering College, Chennai
  • Sujatha P.L, Ravi Reddy, Jaideep Mahendra, Kumanan K, Kumarasamy P, Preetha S.P and Pavithra.S. Identification of therapeutic inhibitors for the treatment of oral cancer using herbal bio-active principles by means of computational approach. Paper presented at 2nd International Conference on Advances in Electrical& Electronics, Information,Communication & Bio Informatics,AEEICB – 2016 held during 27-28 Feb 2016 at Prathyusha Engineering College, Chennai
  • Felix Anto Ophelia E,Sujatha P.L, and Kumarasamy.P. Screening of bioactive compounds from natural remedies for photoaging, to target AP-1; an in silico approach Paper presented at 2nd International Conference on Advances in Electrical& Electronics, Information,Communication & Bio Informatics,AEEICB – 2016 held during 27-28 Feb 2016 at Prathyusha Engineering College, Chennai
  • Sindhu K, Sujith S, Ranjith D, Kumarasamy P, Sujatha P.L and Sanis Juliet Antihyperglymic activity of Flacurtia Montana Fruit Juice and Insilico Docking of Isolated active compounds – An amalgamation of ethno pharmacology with molecular modeling. Paper presented at XV ISVPT on Nutritional Pharmacology and Toxicology beyond calories held at ICAR-NDRI, karnal during 14-16th Jan 2016
  • Sindhu K, Kumarasamy P,Sujatha P.L and sujith S. In silico docking analysis of constituents from herbal insulinomimetics; A novel method for screening and profiling target identification and lead identification in preclinical studies. Paper presented at 7th Kerala Veterinary Science Congress, 2015 during 14-15 November, 2015
  • Sujatha P.L, Preetha S.P, Pavithra S, Bysagi Mohanara, Sureshkannan.S, Balachandran C , Thangapandiyan, Kumarasamy.P, and Selvasubramanian and Cesilia Joseph An insilico strategy to design Galactin-3 inhibitors for the treatment of canine hemangiosarcoma (HAS) Paper presented at Tamil Science Congress held during 13-14 July 2015
  • Nishanthy.R, Rajasulochana.P, Sujatha.P.L, Sureshkannan.S and Kumarsamy.P Insilico study of Polycystic ovarian syndrome (PCOS) and designing its drug with the use of Indian Herbs Abstract published in the Proceedings of National Conference on Biomolecular Engineering 2015 held at Bharath University, Chennai on 10th March 2015
  • Sumathi P, Sureshkannan S, Sujatha P.L and Kumarasamy P. Virtual screening of plant bioactive principles targeting lipo polysaccharides and peptidoglycan synthesis pathway in pathogenic leptospira serovars Abstract published in the Proceedings of National Conference on Biomolecular Engineering 2015 held at Bharath University, Chennai on 10th March 2015
  • Preethi S, Kumarasamy P, Shyamala K, Sujatha P.L and Sureshkannan.S Application of Crispr /Cas 9 System in Genome Editing. Paper presented at International conference on "Applications of Gene Technology" held at School of Life Science, B.S.Abdur Rahman University, Vandalur, Chennai – 600048 during 5-6 June 2014. Proceeding p-43.
  • D.Raman, P Kumarasamy, K Shyamala, P L Sujatha, and S Sureshkannan Application of Genetics in Inherited Cancer Paper presented at International conference on "Applications of Gene Technology" held at School of Life Science, B.S.Abdur Rahman University, Vandalur, Chennai – 600048 during 5-6 June 2014. proceeding p-42.
  • Nandakumar D, Kumarasamy P, Syamala K, Sujatha P.L and S.Sureshkannan Advances in Genetic Research to tackle ageing process Paper presented at International conference on "Applications of Gene Technology" .held at School of Life Science, B.S.Abdur Rahman University, Vandalur, Chennai – 600048 during 5-6 June 2014. proceeding p-41.
  • Sujatha P.L, Kumarasamy P, Sureshkannan S and Premchand S. A Computational Epigenetic Approach in Multi-Drug Designing towards Targeting DNA Methyltransferases (DNMTs) using Phyllanthus Emblica as a lead compound. A New Approach for an emerging frontier Paper presented at International conference on "Applications of Gene Technology" .held at School of Life Science, B.S.Abdur Rahman University, Vandalur, Chennai – 600048 during 5-6 June 2014. proceeding p-28
  • Malathy G, Sundaravalli M, Premchand S, Akhilesh Upgade, Sureshkannan S, Kumarasamy P, Sujatha P L, Anuradha V In Silico Virtual Screening and Molecular Interaction of Phytocomponents present in Emblica officinalis against Acetylcholinesterase (Ache) Enzyme for Aquatic Toxicity Published in Souvenir of National Conference on Innovations implementations and controversies of Animal Biotechnology(NCIICAB), Bharathidasan University, Trichirapalli-620024
  • Srividhya S, Kumarasamy P, Giriprashanthini S, Dhivya B, Sujatha P.L and SureshkannanS A Bioinformatics approach to identify new drug target against HSP90 in Esophageal carcinoma using phytochemicals Paper presented at national seminar on "Perspectives and issues in cancer biology and its prevention" held at Prof. Dhanapalan College of Arts and Sciences, OMR, Kelambakkam-603103 on 27th Feb 2014
  • Giriprashanthini S, Kumarasamy P, Srividhya S, Dhivya B, Sujatha P.L, Sureshkannan S and Premchand S Prediction of Molecular interaction of catenin-β against naturally occurring herbal compounds to identify new drug targets for the treatment liver cancer using in-silico tools Paper presented at national seminar on "Perspectives and issues in cancer biology and its prevention" held at Prof. Dhanapalan College of Arts and Sciences, OMR, Kelambakkam-603103. 27th Feb 2014
  • Dhivya B,Kumarasamy P, Giriprashanthini S, Srividhya S, Sujatha P.L, Sureshkannan S and Premchand S. Molecular interaction study of anticancer against EGFR in lung cancer using CRDD(Computational Resources and Databases in Drug Discovery) Approach. Paper presented at national seminar on "Perspectives and issues in cancer biology and its prevention" held at Prof. Dhanapalan College of Arts and Sciences, OMR, Kelambakkam-603103.27th Feb 2014
  • Premchand S, Kumarasamy K, Sujatha P.L and Sureshkannan S Personalized nutrition for the prevention of cancer:A future perspective Poster presented in Avidham 2013 – International confererence on Innovations in Molecular Therapeutics at Anna University, Chennai-25 28-31 January 2013
  • P.Kumarasamy, P.L.Sujatha, S.Sureshkannan, V.Malarvizhi, M.Seethalakshmi A Bioinformatics Approach to study the anticancerous effects of Momordica Chararifia" Paper presented at national symposium on "Bioinformatics : Role of Bioinformatics in biodiversity management at Botanical Research Institute, Lucknow during 1-2,Feb 2013
  • Kumarasamy P Lead Paper on "Bioinformatics and Genome Analysis in Conservation of Farm Animals" presented in SOCDAB - X National symposium on "Integrated Development of Vast Biodiversity of Indigenous Livestock for Long Term Rural Livelihood Security" at G.B.Pant University of Agriculture & Technology, Pantnagar during 7-8 February 2013
  • Sujatha Mohanakrishnan P.L, Preetha S.P, Kumarasamy P and Sureshkannan S A computational approach to study the combination therapy using HIV Inhibitors against HIV-type 1 infection. Paper presented at III Annual conference of International Association of Medical and Pharmaceutical Virologists (IAMPV) and International symposium on "Challenges and Strategies in the Prevention and management of Viral Infections" at King Institute, Chennai during 09-11 November 2012.
  • Sureshkannan S, Mayankrawat, Anilkumarmishra and Arunkumar S In-Vitro lytic efficacy of Staphylococcus phage crude lysine CL1 and CL3 against Staphylococcus isolates from mastitis cases Paper presented at XXVI Annual convention of IAVMI and International seminar on Future of Livestock Health: A Paradigm Change to Maximize Productivity for Economic Gains conducted at Madras veterinary College, Chennai during 06-08 Sep 2012
  • Kavika, Dhanapalan P, Kumarasamy P,Sureshkannan S and Sujatha P.L Insilico screening and evaluation of herbal bio-active principles against "3DPOL" RNA polymerase enzyme of Foot and Mouth Disease Virus. Paper presented at XXVI Annual convention of IAVMI and International seminar on Future of Livestock Health: A Paradigm Change to Maximize Productivity for Economic Gains conducted at Madras veterinary College, Chennai during 06-08 Sep 2012
  • Devipriya P, Dhanapalan P, Kumarasamy P,SureshkannanS and Sujatha P.L Target validation of VP1 and VP2 antigenic protein of human & canine parvovirus with antiviral herbs: A Bioinformatics Approach Paper presented at XXVI Annual convention of IAVMI and International seminar on Future of Livestock Health: A Paradigm Change to Maximize Productivity for Economic Gains conducted at Madras veterinary College, Chennai during 06-08 Sep 2012
  • Premchand S, Kumarasamy P, Sujatha P.L and Sureshkannan S Personalised nutrition for the prevention of cancer: A future perspective Paper presented at National Conference on "New Trends in Bioinformatics" organized by supercomputing facility for Bioinformatics & computational Biology at IIT, New Delhi during 30-31 July 2012
  • Kumarasamy P, Sujatha P.L and SureshkannanS Epigenetic approach in multi target designing using turmeric as a lead compound by targeting DNA methyltransfererase (DNMTs)" Paper presented at National Conference on "New Trends in Bioinformatics" organized by supercomputing facility for Bioinformatics & computational Biology at IIT, New Delhi during 30-31 July 2012
  • Sujatha P.L,Kumarasamy P and Sureshkannan S A Paradigm shift to predict peptide based vaccine candidates against four serotypes of Dengue virus targeting NS1 protein Paper presented at National Conference on "New Trends in Bioinformatics" organized by supercomputing facility for Bioinformatics & computational Biology at IIT, New Delhi during 30-31 July 2012